Claire Lemaitre

Alumni

Current supervisions:

• Sandra Romain, PhD
  • Working on SV calling and genotyping with long reads, developping the tool SVJedi-graph, within the Divalps ANR project on population genomics of alpine butterflies.
• Anne Guichard, engineer
  • Working on gap-filling and SV calling with linked read data, developping the tools MTG-link, Leviathan, within the Supergene ANR project on inversion polymorphism in mimetic butterflies.
• Lee Mariault, Master (M2) internship
  • Working on SV calling and genotyping with short reads on a polyploid genome (nematode, collaboration with Etienne Danchin, Inrae, Nice).

Former PhD students:

• Lolita Lecompte (2017-2020)
  • Structural variant genotyping with long read data. (tel-03082460)
• Wesley Delage (2017-2020)
  • Characterization and detection of large constitutional insertions for medical use. (tel-03084361)
• Cervin Guyomar (2015-2018)
• Bioinformatic tools and applications for metagenomics of microbial communities associated to insects. (tel-01955222)
• Gaëtan Benoit (2014-2017)
• Large scale de novo comparative metagenomics. (tel-01659395)

Former engineer and post-doctoral researchers:

• Pierre Morisse (2020-2021)
• Jérémy Gauthier (2017-2018)
• Anaïs Gouin (2012-2015)
• Liviu Ciortuz (2012-2013)
• Thomas Derrien (2011-2012)

Former Master internships:

• Sandra Romain (2021)
• Arthur Le Bars (2019)
• Wesley Delage (2017)
• Charlotte Mouden (2017)
• Mael Kerbiriou (2017)
• Mathieu Perrotin (2016)
• Pierre Marijon (2015)
• Gaëtan Benoit (2013 and 2014)
• Julien Erabit (2013)
• Bastien Hervé (2013)
• Elise Larsonneur (2012)
• Quentin Oliveau (2012)
• Olivier Rué (2011)